STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM55796.1Hypothetical protein. (89 aa)    
Predicted Functional Partners:
KRM55795.1
SgaT protein.
 
 
 0.989
KRM55797.1
Hypothetical protein.
 
     0.932
KRM54848.1
Sucrose-specific PTS system IIBC component.
 
   
 0.776
KRM56255.1
PTS family porter fructose-specific component IIB.
  
 
 0.690
KRM56513.1
Fructose-specific phosphotransferase system, enzyme IIABC.
  
 
 0.690
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
       0.682
KRM55233.1
PTS system sugar-specific transporter subunit II.
 
 
 0.648
KRM54564.1
PTS family galactitol (gat) porter component IIC.
 
 
 0.633
trpA
Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
       0.619
trpF
N-(5-phosphoribosyl)anthranilate isomerase (PRAI); Belongs to the TrpF family.
       0.588
Your Current Organism:
Lactobacillus sharpeae
NCBI taxonomy Id: 1291052
Other names: L. sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae DSM 20505, Lactobacillus sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae LMG 9214, Lactobacillus sharpeae NCIB 11720
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.