STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM55759.1Hypothetical protein. (112 aa)    
Predicted Functional Partners:
KRM55351.1
Hypothetical protein.
  
     0.725
KRM55892.1
Hypothetical protein.
  
     0.720
KRM54423.1
Hypothetical protein.
  
     0.675
KRM55733.1
Hypothetical protein.
  
     0.650
KRM54754.1
Hypothetical protein.
  
     0.591
KRM54852.1
Hypothetical protein.
  
     0.588
KRM55620.1
Hypothetical protein.
  
     0.586
KRM54316.1
Hypothetical protein.
  
     0.510
KRM55631.1
Hypothetical protein.
  
     0.506
KRM54424.1
Hypothetical protein.
  
     0.501
Your Current Organism:
Lactobacillus sharpeae
NCBI taxonomy Id: 1291052
Other names: L. sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae DSM 20505, Lactobacillus sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae LMG 9214, Lactobacillus sharpeae NCIB 11720
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