STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM55627.1Cell surface protein. (344 aa)    
Predicted Functional Partners:
KRM55836.1
Hypothetical protein.
 
     0.637
KRM55628.1
Hypothetical protein.
       0.596
KRM55626.1
Hypothetical protein.
       0.567
KRM54423.1
Hypothetical protein.
  
     0.546
KRM55304.1
Hypothetical protein.
 
  
  0.498
KRM54837.1
Glucose uptake permease.
  
     0.462
KRM56501.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
   
 
  0.422
KRM56651.1
Hypothetical protein.
 
 
  0.413
KRM55081.1
Hypothetical protein.
    
  0.401
KRM54424.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Lactobacillus sharpeae
NCBI taxonomy Id: 1291052
Other names: L. sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae DSM 20505, Lactobacillus sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae LMG 9214, Lactobacillus sharpeae NCIB 11720
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.