STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM55319.1Hypothetical protein. (156 aa)    
Predicted Functional Partners:
KRM55320.1
Cysteine desulfurase.
 
 0.999
KRM54891.1
Cysteine desulfurase Selenocysteine lyase.
  
 0.997
KRM54756.1
Cysteine sulfinate desulfinase cysteine desulfurase.
  
 0.997
KRM55321.1
Fe-S cluster assembly ABC-type transport system, permease component.
 
  
 0.995
KRM55322.1
Fe-S cluster assembly ABC-type transport system, ATPase component.
 
  
 0.994
KRM55318.1
ABC transporter.
 
  
 0.993
dnaK
Chaperone protein dnak; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.984
KRM55018.1
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
   
 
 0.945
KRM55323.1
Hypothetical protein.
  
    0.938
KRM55324.1
Organic radical activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
     
 0.649
Your Current Organism:
Lactobacillus sharpeae
NCBI taxonomy Id: 1291052
Other names: L. sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae DSM 20505, Lactobacillus sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae LMG 9214, Lactobacillus sharpeae NCIB 11720
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.