STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM54629.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
KRM54622.1
Sheath tail protein.
 
 
 0.999
KRM54626.1
Hypothetical protein.
 
   0.999
KRM54630.1
Baseplate J-like protein.
 
 
 0.999
KRM54631.1
Hypothetical protein.
 
 
 0.999
KRM54632.1
Hypothetical protein.
 
    0.959
KRM54627.1
Hypothetical protein.
 
    0.939
KRM54625.1
Minor tail protein.
 
     0.928
KRM54624.1
Hypothetical protein.
 
    0.901
KRM54623.1
Phage core tail protein.
 
    0.890
KRM54628.1
Hypothetical protein.
  
    0.853
Your Current Organism:
Lactobacillus sharpeae
NCBI taxonomy Id: 1291052
Other names: L. sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae DSM 20505, Lactobacillus sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae LMG 9214, Lactobacillus sharpeae NCIB 11720
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