STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY88926.1Tail fiber domain-containing protein. (367 aa)    
Predicted Functional Partners:
KPY88945.1
Prophage PssSM-03, putative major capsid protein.
 
 
 
 0.874
KPY88929.1
Prophage PssSM-03, phage portal protein.
 
 
 
 0.791
KPY88924.1
Uncharacterized protein.
  
    0.791
KPY88958.1
Hypothetical protein.
  
    0.791
KPY88922.1
Phage head-tail adaptor.
  
   0.782
KPY88943.1
Prophage PssSM-03, Orf21.
   
   0.779
KPY81093.1
Type III effector HopO1-1.
   
 
 0.750
KPY83112.1
Serralysin.
 
 
   0.739
KPY88089.1
Glycosyl hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
   0.731
KPY89158.1
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.
   
   0.723
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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