STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY89066.1Ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (334 aa)    
Predicted Functional Partners:
KPY89035.1
Putative Ribose ABC transporter, ATP-binding protein.
 
 0.993
KPY89124.1
Ribose ABC transporter periplasmic ribose-binding protein.
 
 0.992
KPY86893.1
Ribose ABC transporter periplasmic ribose-binding protein.
 0.970
KPY82815.1
Ribose ABC transporter, ATP-binding protein.
 
 0.969
KPY86463.1
Periplasmic substrate-binding protein.
 
 0.969
KPY86919.1
Ribose ABC transporter ATP-binding protein.
 
 0.968
KPY89188.1
Ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.962
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
 
 0.940
KPY89084.1
Sugar ABC transporter periplasmic sugar-binding protein.
 0.925
xylG
Xylose import ATP-binding protein XylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.924
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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