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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY83789.1IS3 family transposase orfA. (92 aa)    
Predicted Functional Partners:
KPY83785.1
ISPsy26, transposase orfB.
 
   
 0.938
KPY80113.1
Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.831
KPY89014.1
ISPsy26, transposase orfB.
 
   
 0.753
KPY80747.1
Indolepyruvate ferredoxin oxidoreductase.
    
 0.748
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.740
KPY82962.1
Non-ribosomal peptide synthetase, initiating component; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.724
KPY83798.1
Cytochrome c, mono-and diheme variant family.
       0.642
KPY88568.1
ISPsy24, transposase OrfB.
 
   
 0.577
KPY82901.1
Non-ribosomal peptide synthetase/polyketide synthetase.
   
 0.568
KPY84150.1
Uncharacterized protein.
  
 
 0.557
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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