Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPY80827.1 | KPY86418.1 | ALO44_02505 | ALO44_00601 | Glycoside hydrolase family protein. | Ribonuclease BN. | 0.625 |
KPY81562.1 | KPY86418.1 | ALO44_04887 | ALO44_00601 | Calcium/proton antiporter. | Ribonuclease BN. | 0.496 |
KPY82429.1 | KPY86418.1 | ALO44_02766 | ALO44_00601 | TspO/MBR-related protein. | Ribonuclease BN. | 0.437 |
KPY82429.1 | KPY86425.1 | ALO44_02766 | ALO44_00602 | TspO/MBR-related protein. | Mismatched base pair and cruciform DNA recognition protein; Belongs to the UPF0337 (CsbD) family. | 0.445 |
KPY84810.1 | KPY86418.1 | ALO44_04017 | ALO44_00601 | Uncharacterized protein. | Ribonuclease BN. | 0.447 |
KPY86418.1 | KPY80827.1 | ALO44_00601 | ALO44_02505 | Ribonuclease BN. | Glycoside hydrolase family protein. | 0.625 |
KPY86418.1 | KPY81562.1 | ALO44_00601 | ALO44_04887 | Ribonuclease BN. | Calcium/proton antiporter. | 0.496 |
KPY86418.1 | KPY82429.1 | ALO44_00601 | ALO44_02766 | Ribonuclease BN. | TspO/MBR-related protein. | 0.437 |
KPY86418.1 | KPY84810.1 | ALO44_00601 | ALO44_04017 | Ribonuclease BN. | Uncharacterized protein. | 0.447 |
KPY86418.1 | KPY86425.1 | ALO44_00601 | ALO44_00602 | Ribonuclease BN. | Mismatched base pair and cruciform DNA recognition protein; Belongs to the UPF0337 (CsbD) family. | 0.693 |
KPY86418.1 | KPY87719.1 | ALO44_00601 | ALO44_00838 | Ribonuclease BN. | Glycosyl hydrolase family protein. | 0.625 |
KPY86418.1 | KPY88190.1 | ALO44_00601 | ALO44_02541 | Ribonuclease BN. | Low molecular weight phosphotyrosine protein phosphatase. | 0.511 |
KPY86418.1 | def | ALO44_00601 | ALO44_00600 | Ribonuclease BN. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.685 |
KPY86418.1 | rnpA | ALO44_00601 | ALO44_00871 | Ribonuclease BN. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.720 |
KPY86418.1 | rph | ALO44_00601 | ALO44_03060 | Ribonuclease BN. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.683 |
KPY86425.1 | KPY82429.1 | ALO44_00602 | ALO44_02766 | Mismatched base pair and cruciform DNA recognition protein; Belongs to the UPF0337 (CsbD) family. | TspO/MBR-related protein. | 0.445 |
KPY86425.1 | KPY86418.1 | ALO44_00602 | ALO44_00601 | Mismatched base pair and cruciform DNA recognition protein; Belongs to the UPF0337 (CsbD) family. | Ribonuclease BN. | 0.693 |
KPY86425.1 | def | ALO44_00602 | ALO44_00600 | Mismatched base pair and cruciform DNA recognition protein; Belongs to the UPF0337 (CsbD) family. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.404 |
KPY87719.1 | KPY86418.1 | ALO44_00838 | ALO44_00601 | Glycosyl hydrolase family protein. | Ribonuclease BN. | 0.625 |
KPY88190.1 | KPY86418.1 | ALO44_02541 | ALO44_00601 | Low molecular weight phosphotyrosine protein phosphatase. | Ribonuclease BN. | 0.511 |
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