STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY85360.1Proteinral secretion pathway protein I. (123 aa)    
Predicted Functional Partners:
KPY80818.1
Proteinral secretion pathway protein GspJ.
  
 0.939
KPY85366.1
Proteinral secretion pathway protein K.
  
 
 0.892
KPY87535.1
Type IV pilus bioproteinsis protein.
  
 0.796
KPY83103.1
Proteinral secretion pathway protein E.
  
 0.796
KPY85353.1
Proteinral secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 0.796
KPY85370.1
Proteinral secretion pathway protein F.
  
  
 0.752
KPY79988.1
Type II secretion system protein.
  
  
 0.724
KPY80440.1
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.698
KPY80246.1
DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.683
KPY84310.1
Uncharacterized protein.
   
 0.582
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.