STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY85390.1Putative proteinral secretion pathway protein GspL. (365 aa)    
Predicted Functional Partners:
KPY89626.1
Fimbrial assembly.
  
 0.955
KPY85366.1
Proteinral secretion pathway protein K.
 
   
 0.955
KPY89658.1
Type II and III secretion system protein:NolW-like protein:NolW-like protein.
  
 
 0.857
KPY85370.1
Proteinral secretion pathway protein F.
 
 
 
 0.809
KPY89619.1
Type IV pilus bioproteinsis protein PilO.
  
 
 0.803
KPY82218.1
Proteinral secretion pathway protein M.
 
   
 0.799
KPY89679.1
Type IV pilus bioproteinsis protein PilP.
  
 
 0.796
KPY85353.1
Proteinral secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 
 0.792
KPY89567.1
LysM domain protein.
  
 
   0.791
KPY82312.1
Proteinral secretion pathway protein D.
 
  
 0.783
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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