STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY88458.1Uncharacterized protein. (66 aa)    
Predicted Functional Partners:
KPY88263.1
Putative Fusaric acid resistance protein.
 
   
 0.953
KPY88524.1
Outer membrane component of tripartite multidrug resistance system.
 
   
 0.885
KPY88545.1
Fusaric acid resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.863
KPY88333.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.660
KPY82925.1
Putative glycine-glutamate dipeptide porin OpdP.
  
     0.660
KPY80186.1
Cation transporter.
  
     0.598
KPY87976.1
N-acyl-D-glucosamine 2-epimerase.
  
     0.540
KPY88512.1
Alginate biosynthesis protein AlgX.
  
     0.528
KPY89012.1
Uncharacterized protein.
  
     0.526
KPY87973.1
Membrane protein.
  
     0.522
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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