STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eutCEthanolamine ammonia-lyase light chain; Belongs to the EutC family. (282 aa)    
Predicted Functional Partners:
KPY81576.1
Ethanolamine ammonia-lyase heavy chain.
 
 0.999
KPY84811.1
Ethanolamine permease family protein.
 
  
 0.774
KPY81570.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.659
KPY82991.1
AraC family transcriptional regulator.
 
   
 0.628
KPY81560.1
Acetyltransferase, GNAT family.
       0.617
KPY80435.1
Iron-containing alcohol dehydrogenase.
    
 0.548
KPY89211.1
Alcohol dehydrogenase, iron-containing.
    
 0.548
KPY80884.1
Alcohol dehydrogenase II.
    
 0.548
KPY88370.1
Molybdopterin biosynthesis MoaE.
    
   0.461
KPY89423.1
Heat shock protein 15; Belongs to the HSP15 family.
    
   0.461
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.