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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY90270.1Uncharacterized protein. (151 aa)    
Predicted Functional Partners:
KPY90244.1
Flp pilus assembly protein, ATPase TadZ/CpaE.
 
  
 0.972
KPY90377.1
Flp pilus assembly protein CpaB.
 
  
 0.969
KPY90251.1
Type II secretion system protein.
 
  
 0.938
KPY90229.1
Sensory box histidine kinase.
 
    0.934
KPY90284.1
Putative Membrane protein.
 
  
 0.906
KPY90336.1
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.840
KPY90248.1
TPR domain-containing protein.
 
  
 0.826
KPY90300.1
Uncharacterized protein.
 
     0.806
KPY90223.1
Proteinral secretion pathway/type 4 pilus assembly protein.
 
  
 0.738
KPY90375.1
Peptidase A24A, prepilin type IV.
  
  
 0.729
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.