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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY82508.1Threonine/serine transporter. (425 aa)    
Predicted Functional Partners:
KPY87956.1
Uncharacterized protein.
    
 0.814
KPY87929.1
Putative Toluene tolerance protein.
    
 0.814
KPY82078.1
InaA protein.
    
 0.814
KPY87966.1
InaA protein.
    
 0.814
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
     
 0.788
KPY86774.1
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
 0.782
KPY82637.1
L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
 
  
 0.772
KPY86797.1
Oxidoreductase, zinc-binding protein.
     
 0.751
KPY84145.1
Quinolinate phosphoribosyltransferase; Belongs to the NadC/ModD family.
     
 0.751
gpsA
Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.749
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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