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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY86105.1Bactin synthetase, salycilate ligase component Irp5. (526 aa)    
Predicted Functional Partners:
KPY80695.1
Pyoverdine sidechain peptide synthetase III, L-Thr-L-Ser component.
 0.982
KPY87053.1
Ornithine acetyl transferase inhibitor.
0.980
KPY82962.1
Non-ribosomal peptide synthetase, initiating component; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.975
KPY80317.1
Pyoverdine sidechain peptide synthetase II, D-Asp-L-Thr component.
 0.954
KPY82901.1
Non-ribosomal peptide synthetase/polyketide synthetase.
 
0.953
KPY82935.1
Non-ribosomal peptide synthetase, initiating component.
 
0.938
KPY86113.1
Bactin synthetase, thioesterase component Irp4.
 
  
 0.907
KPY86102.1
Yersiniabactin polyketide/non-ribosomal peptide synthetase.
 
   
 0.891
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.891
KPY88597.1
Pyoverdine sidechain peptide synthetase III, L-Thr-L-Ser component.
 0.870
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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