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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY86112.1Uncharacterized protein. (408 aa)    
Predicted Functional Partners:
KPY86117.1
Bactin synthetase, thiazolinyl reductase component Irp3.
 
  
 0.945
KPY86116.1
Isochorismate synthase.
  
  
 0.933
KPY86103.1
Isochorismate pyruvate-lyase.
  
 
  0.924
KPY86113.1
Bactin synthetase, thioesterase component Irp4.
 
  
 0.874
KPY86102.1
Yersiniabactin polyketide/non-ribosomal peptide synthetase.
 
  
  0.873
KPY86110.1
Yersiniabactin non-ribosomal peptide synthetase.
 
  
  0.850
KPY86105.1
Bactin synthetase, salycilate ligase component Irp5.
 
  
  0.830
KPY88271.1
Homoserine dehydrogenase.
   
  0.767
KPY84684.1
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.742
KPY86108.1
ABC transporter, ATP-binding/permease protein.
  
  
 0.716
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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