STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY80819.1Uncharacterized protein. (280 aa)    
Predicted Functional Partners:
KPY80812.1
Uncharacterized protein.
       0.800
KPY80852.1
2-nitropropane dioxygenase.
       0.763
KPY80767.1
3-isopropylmalate dehydrogenase.
    
  0.660
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.637
KPY80749.1
4-hydroxy-2-oxovalerate aldolase domain-containing protein.
   
  0.613
KPY80760.1
Uncharacterized protein.
       0.559
KPY87329.1
Phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.553
KPY85512.1
Uncharacterized protein.
   
 
 0.525
KPY80741.1
Uncharacterized protein.
       0.523
KPY89187.1
Uncharacterized protein.
   
 
 0.522
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
Server load: low (34%) [HD]