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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY80846.1Sensor histidine kinase. (434 aa)    
Predicted Functional Partners:
KPY84102.1
Response regulator, sensor histidine kinase component GacS.
 0.999
KPY84998.1
Sensory box histidine kinase/response regulator.
 
0.999
KPY89253.1
Sensor y box histidine kinase/response regulator.
 
0.999
KPY88505.1
Sensory box protein/response regulator.
 
 0.999
KPY88268.1
PAS/PAC sensor signal transduction histidine kinase.
 0.999
KPY88499.1
Signal transduction histidine kinase.
 0.999
KPY86755.1
Response regulator receiver:ATP-binding region.
 0.999
KPY82502.1
Sensor histidine kinase/response regulator.
 0.999
KPY80813.1
Sensory box histidine kinase.
 
0.999
KPY88068.1
Hybrid two-component sensor histidine kinase/response regulator CvgSY.
 0.999
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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