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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY80758.1DeoR family transcriptional regulator. (252 aa)    
Predicted Functional Partners:
KPY87329.1
Phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.896
KPY87320.1
PTS system fructose-specific transporter subunits IIBC.
 
  
 0.887
KPY80796.1
Aminoglycoside phosphotransferase.
 
     0.831
KPY80771.1
Choline kinase.
 
     0.823
KPY80782.1
Putative deacylase.
       0.804
KPY86821.1
Putative ribose 5-phosphate isomerase B.
  
 
 0.641
KPY80776.1
Amidase family protein.
  
    0.633
KPY80828.1
Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.607
KPY87311.1
Multifunctional PTS system fructose-like transporter subunit IIA/phosphocarrier protein HPr/phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
 
  
 0.554
KPY82063.1
PTS IIA-like nitrogen-regulatory protein PtsN.
 
  
 0.518
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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