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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY80796.1Aminoglycoside phosphotransferase. (317 aa)    
Predicted Functional Partners:
KPY80771.1
Choline kinase.
 
    
0.861
KPY80828.1
Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.854
KPY80782.1
Putative deacylase.
 
     0.843
KPY80758.1
DeoR family transcriptional regulator.
 
     0.831
KPY87956.1
Uncharacterized protein.
    
 0.749
KPY87929.1
Putative Toluene tolerance protein.
    
 0.749
KPY82078.1
InaA protein.
    
 0.749
KPY87966.1
InaA protein.
    
 0.749
KPY81177.1
Hypothetical protein.
  
     0.647
KPY80776.1
Amidase family protein.
 
     0.645
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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