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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY80797.1Paraquat-inducible protein A. (212 aa)    
Predicted Functional Partners:
KPY80794.1
Paraquat-inducible protein A.
    
0.985
KPY80743.1
Uncharacterized protein.
 
  
 0.960
KPY80768.1
Paraquat-inducible protein B.
 
  
 0.953
KPY89194.1
PqiB family protein.
 
  
 0.804
lipB
Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
   
    0.547
KPY87977.1
Putative Lipoprotein.
 
  
 0.495
KPY80803.1
Uncharacterized protein.
       0.434
KPY80850.1
Helix-hairpin-helix DNA-binding motif-containing protein.
       0.430
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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