Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPY80416.1 | KPY80430.1 | ALO44_04552 | ALO44_00103 | Flagellin, N-terminal. | Flagellar hook protein FlgE. | 0.969 |
KPY80416.1 | KPY80434.1 | ALO44_04552 | ALO44_00099 | Flagellin, N-terminal. | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | 0.996 |
KPY80416.1 | KPY80437.1 | ALO44_04552 | ALO44_00091 | Flagellin, N-terminal. | Flagellin, C-terminal:Flagellin, N-terminal; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.985 |
KPY80416.1 | KPY80461.1 | ALO44_04552 | ALO44_00089 | Flagellin, N-terminal. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.991 |
KPY80416.1 | KPY82376.1 | ALO44_04552 | ALO44_02742 | Flagellin, N-terminal. | Type III helper protein HopP1. | 0.458 |
KPY80416.1 | KPY87418.1 | ALO44_04552 | ALO44_100464 | Flagellin, N-terminal. | Flagellum-specific ATP synthase. | 0.919 |
KPY80416.1 | KPY87434.1 | ALO44_04552 | ALO44_03670 | Flagellin, N-terminal. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.976 |
KPY80416.1 | fliE | ALO44_04552 | ALO44_100019 | Flagellin, N-terminal. | Flagellar hook-basal body complex protein FliE. | 0.964 |
KPY80416.1 | hrcN | ALO44_04552 | ALO44_01291 | Flagellin, N-terminal. | Type III secretion cytoplasmic ATPase HrcN. | 0.806 |
KPY80430.1 | KPY80416.1 | ALO44_00103 | ALO44_04552 | Flagellar hook protein FlgE. | Flagellin, N-terminal. | 0.969 |
KPY80430.1 | KPY80434.1 | ALO44_00103 | ALO44_00099 | Flagellar hook protein FlgE. | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | 0.989 |
KPY80430.1 | KPY80437.1 | ALO44_00103 | ALO44_00091 | Flagellar hook protein FlgE. | Flagellin, C-terminal:Flagellin, N-terminal; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.946 |
KPY80430.1 | KPY80461.1 | ALO44_00103 | ALO44_00089 | Flagellar hook protein FlgE. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.968 |
KPY80430.1 | KPY82376.1 | ALO44_00103 | ALO44_02742 | Flagellar hook protein FlgE. | Type III helper protein HopP1. | 0.444 |
KPY80430.1 | KPY87418.1 | ALO44_00103 | ALO44_100464 | Flagellar hook protein FlgE. | Flagellum-specific ATP synthase. | 0.925 |
KPY80430.1 | KPY87434.1 | ALO44_00103 | ALO44_03670 | Flagellar hook protein FlgE. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.967 |
KPY80430.1 | fliE | ALO44_00103 | ALO44_100019 | Flagellar hook protein FlgE. | Flagellar hook-basal body complex protein FliE. | 0.988 |
KPY80430.1 | hrcN | ALO44_00103 | ALO44_01291 | Flagellar hook protein FlgE. | Type III secretion cytoplasmic ATPase HrcN. | 0.876 |
KPY80434.1 | KPY80416.1 | ALO44_00099 | ALO44_04552 | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | Flagellin, N-terminal. | 0.996 |
KPY80434.1 | KPY80430.1 | ALO44_00099 | ALO44_00103 | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | Flagellar hook protein FlgE. | 0.989 |
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