Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPY80218.1 | KPY80242.1 | ALO44_03174 | ALO44_03176 | Pseudouridine synthase. | Site-determining protein. | 0.611 |
KPY80218.1 | apeB | ALO44_03174 | ALO44_100191 | Pseudouridine synthase. | Aspartyl aminopeptidase. | 0.646 |
KPY80218.1 | lpxL | ALO44_03174 | ALO44_05330 | Pseudouridine synthase. | Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). | 0.403 |
KPY80218.1 | minC | ALO44_03174 | ALO44_03177 | Pseudouridine synthase. | Putative septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.426 |
KPY80218.1 | minE | ALO44_03174 | ALO44_03175 | Pseudouridine synthase. | Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.611 |
KPY80242.1 | KPY80218.1 | ALO44_03176 | ALO44_03174 | Site-determining protein. | Pseudouridine synthase. | 0.611 |
KPY80242.1 | KPY84722.1 | ALO44_03176 | ALO44_03696 | Site-determining protein. | Rod shape-determining protein MreC. | 0.863 |
KPY80242.1 | KPY84731.1 | ALO44_03176 | ALO44_03697 | Site-determining protein. | Rod shape-determining protein MreB. | 0.649 |
KPY80242.1 | KPY84733.1 | ALO44_03176 | ALO44_03695 | Site-determining protein. | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | 0.803 |
KPY80242.1 | apeB | ALO44_03176 | ALO44_100191 | Site-determining protein. | Aspartyl aminopeptidase. | 0.508 |
KPY80242.1 | ftsZ | ALO44_03176 | ALO44_101898 | Site-determining protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.634 |
KPY80242.1 | gatB | ALO44_03176 | ALO44_03700 | Site-determining protein. | Aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.424 |
KPY80242.1 | lpxL | ALO44_03176 | ALO44_05330 | Site-determining protein. | Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). | 0.427 |
KPY80242.1 | minC | ALO44_03176 | ALO44_03177 | Site-determining protein. | Putative septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.999 |
KPY80242.1 | minE | ALO44_03176 | ALO44_03175 | Site-determining protein. | Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.999 |
KPY84722.1 | KPY80242.1 | ALO44_03696 | ALO44_03176 | Rod shape-determining protein MreC. | Site-determining protein. | 0.863 |
KPY84722.1 | KPY84731.1 | ALO44_03696 | ALO44_03697 | Rod shape-determining protein MreC. | Rod shape-determining protein MreB. | 0.997 |
KPY84722.1 | KPY84733.1 | ALO44_03696 | ALO44_03695 | Rod shape-determining protein MreC. | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | 0.994 |
KPY84722.1 | ftsZ | ALO44_03696 | ALO44_101898 | Rod shape-determining protein MreC. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.677 |
KPY84722.1 | gatB | ALO44_03696 | ALO44_03700 | Rod shape-determining protein MreC. | Aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.660 |
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