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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY82091.1Uncharacterized protein. (447 aa)    
Predicted Functional Partners:
KPY82072.1
ATPase.
 
  
 0.957
KPY82128.1
Uncharacterized protein.
 
    0.941
KPY82130.1
Uncharacterized protein.
 
    0.917
KPY82163.1
Membrane protein.
 
  
 0.903
KPY89456.1
RDD domain-containing protein.
 
    0.879
KPY89469.1
Integral membrane protein.
 
  
 0.841
KPY86705.1
Putative MoxR protein.
 
  
 0.754
KPY86311.1
Putative MoxR protein.
 
  
 0.675
KPY86691.1
Von Willebrand factor type A domain protein.
 
  
 0.586
KPY86318.1
Transglutaminase-like protein.
 
  
 0.502
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.