STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY87815.1LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (306 aa)    
Predicted Functional Partners:
KPY89039.1
Regulatory protein LysR; Belongs to the LysR transcriptional regulatory family.
  
     0.702
KPY82626.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.658
KPY85740.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.609
KPY84865.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.581
KPY83124.1
Regulatory protein, LysR:LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.567
KPY88137.1
LysR family transcriptional regulator YeiE; Belongs to the LysR transcriptional regulatory family.
  
     0.549
KPY86594.1
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.547
KPY83985.1
Pca operon transcription factor PcaQ; Belongs to the LysR transcriptional regulatory family.
  
     0.542
KPY87826.1
Tartrate dehydrogenase.
       0.541
KPY88176.1
Regulatory protein, LysR:LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.536
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.