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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY87821.1Multicopper oxidase. (592 aa)    
Predicted Functional Partners:
KPY87842.1
Copper resistance protein B.
 
  
 0.992
KPY81787.1
Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.880
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.859
KPY87822.1
Sensory box histidine kinase/response regulator.
  
 
 0.836
KPY87587.1
Cytochrome c5.
    
 
 0.827
KPY82901.1
Non-ribosomal peptide synthetase/polyketide synthetase.
     
 0.820
tatC
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.811
KPY88499.1
Signal transduction histidine kinase.
  
 
 0.811
KPY84024.1
Two component system hybrid sensory histidine kinase/EvgA-like protein.
  
 
 0.811
KPY89253.1
Sensor y box histidine kinase/response regulator.
  
 
 0.809
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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