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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY87325.1MFS transporter. (58 aa)    
Predicted Functional Partners:
KPY87319.1
Sensory box histidine kinase.
 
   
 0.889
KPY87333.1
Sigma-54 dependent transcriptional regulator/response regulator.
     
 0.792
KPY87553.1
Uncharacterized protein.
  
     0.768
KPY87236.1
Uncharacterized protein.
  
     0.766
KPY88423.1
TetR family transcriptional regulator.
  
     0.755
KPY89419.1
Uncharacterized protein.
  
     0.755
KPY88093.1
Uncharacterized protein.
  
     0.744
KPY88010.1
Chemosensory protein ChpC.
  
     0.724
KPY87949.1
Uncharacterized protein.
  
     0.719
KPY84294.1
Alginate regulatory protein MucA.
  
     0.652
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.