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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY86557.1Response regulator receiver:transcriptional regulatory protein. (267 aa)    
Predicted Functional Partners:
KPY86556.1
Sensor histidine kinase.
 
 0.984
KPY88268.1
PAS/PAC sensor signal transduction histidine kinase.
 
 0.975
KPY88499.1
Signal transduction histidine kinase.
 
 0.973
KPY84102.1
Response regulator, sensor histidine kinase component GacS.
 
0.972
KPY83853.1
Histidine kinase-response regulator hybrid protein.
 
 
 0.970
KPY87822.1
Sensory box histidine kinase/response regulator.
  
 0.969
KPY84024.1
Two component system hybrid sensory histidine kinase/EvgA-like protein.
 
0.969
KPY89253.1
Sensor y box histidine kinase/response regulator.
 
 0.968
KPY80189.1
Two-component hybrid sensor histidine kinase/response regulator.
 
 
 0.968
KPY84577.1
Sensory box histidine kinase/response regulator.
 
 
 0.968
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.