Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KPY80507.1C4 dicarboxylate transport two-component response regulator. (461 aa)    
Predicted Functional Partners:
KPY80511.1
Sensor histidine kinase.
 
 0.993
KPY85008.1
Sensor histidine kinase.
 
 0.975
KPY85007.1
Sigma-54 dependent DNA-binding response regulator.
  
  
 
0.904
KPY87920.1
Response regulator/sensory box/GGDEF domain/EAL domain-containing protein.
  
 0.814
KPY85589.1
Nitrogen metabolism regulation protein NtrB/NR.
 
 0.796
KPY82155.1
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.777
KPY87410.1
Site-determining protein.
  
 
 0.753
KPY84296.1
Sensor histidine kinase.
 
 0.712
KPY83771.1
Peptidase M50.
  
 
 0.657
KPY80846.1
Sensor histidine kinase.
 
 0.613
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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