STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY84479.1Tail fiber assembly domain-containing protein. (181 aa)    
Predicted Functional Partners:
KPY84466.1
Tail fiber protein H.
  
  
 0.959
KPY84444.1
Bacteriophage Mu P.
  
    0.881
KPY84490.1
Tail protein.
  
  
 0.878
KPY84494.1
Baseplate J-like protein.
  
    0.857
KPY84460.1
Tail tape measure protein.
     
 0.840
KPY84482.1
Phage GP46.
       0.798
KPY84439.1
Phage baseplate assembly protein V.
       0.798
KPY84465.1
Prophage PSPPH01, DNA circulation protein.
       0.798
KPY87764.1
Prophage PSPPH02, tail protein X.
  
    0.751
KPY87769.1
Prophage PSPPH02, putative late control protein D protein.
  
  
 0.716
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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