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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY84466.1Tail fiber protein H. (510 aa)    
Predicted Functional Partners:
KPY84479.1
Tail fiber assembly domain-containing protein.
  
  
 0.959
KPY87777.1
Phage protein U.
  
  
 0.897
KPY87769.1
Prophage PSPPH02, putative late control protein D protein.
  
  
 0.879
KPY87764.1
Prophage PSPPH02, tail protein X.
  
    0.875
KPY84490.1
Tail protein.
 
     0.864
KPY84465.1
Prophage PSPPH01, DNA circulation protein.
 
    0.858
KPY84460.1
Tail tape measure protein.
 
   
 0.855
KPY84494.1
Baseplate J-like protein.
 
     0.848
KPY84482.1
Phage GP46.
 
    0.842
KPY84439.1
Phage baseplate assembly protein V.
 
    0.841
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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