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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY84481.1Repressor protein c2. (215 aa)    
Predicted Functional Partners:
KPY80767.1
3-isopropylmalate dehydrogenase.
    
 0.759
argA
Amino-acid acetyltransferase.
    
  0.750
KPY82490.1
Prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase family protein.
     
 0.617
KPY84467.1
Uncharacterized protein.
       0.522
KPY84460.1
Tail tape measure protein.
 
     0.507
KPY84489.1
Uncharacterized protein.
       0.474
KPY85749.1
CbsD/ElaB superfamily protein.
  
     0.463
KPY86576.1
Hypothetical protein.
  
   
 0.421
KPY82818.1
Integrase; Belongs to the 'phage' integrase family.
 
   
 0.415
KPY84519.1
Prophage PssSM-02, tail length tape-measure protein.
  
     0.408
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.