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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY84443.1Extracellular solute-binding protein. (344 aa)    
Predicted Functional Partners:
KPY84436.1
Polyamine ABC transporter permease.
 
 
 0.975
KPY84488.1
Spermidine/putrescine ABC transporter permease component.
 
 
 0.972
potA-2
Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.961
KPY82395.1
Binding-protein-dependent transport (system) inner membrane component.
 
 
 0.900
KPY87710.1
ABC transporter permease.
 
 
 0.884
KPY82438.1
Binding-protein dependent transport system inner membrane protein.
 
 
 0.871
KPY82391.1
Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.746
KPY87741.1
Spermidine/putrescine ABC-type transport system, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.685
KPY84308.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.616
potA
Putrescine transport ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
 
 0.616
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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