STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY83834.1TonB-denpendent receptor. (761 aa)    
Predicted Functional Partners:
KPY83821.1
Biopolymer transporter TonB.
 
 0.965
KPY83886.1
TonB system transport protein.
  
 
 0.870
KPY87694.1
Outer membrane transport energization protein TonB.
 
 0.858
KPY87593.1
TonB protein.
 
 0.856
KPY83840.1
Biopolymer transporter ExbB.
  
 
 0.834
KPY82315.1
TolA protein.
  
 0.833
KPY90382.1
Uncharacterized protein.
  
 0.833
KPY88874.1
Putative TonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 0.833
KPY89277.1
Ferric siderophore transport system, periplasmic binding protein TonB.
  
 0.833
KPY87951.1
TonB domain-containing protein.
  
 0.832
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.