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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY83111.1tRNA 5-methylaminomethyl-2-thiouridine synthase TusC; Belongs to the DsrF/TusC family. (120 aa)    
Predicted Functional Partners:
KPY83106.1
DsrH like protein.
 
 0.999
KPY83121.1
tRNA 5-methylaminomethyl-2-thiouridine synthase TusD.
 
 0.999
KPY83100.1
Sulfurtransferase; Part of a sulfur-relay system.
 
 
 0.990
KPY83127.1
Uncharacterized protein.
 
    0.889
tusA
Sulfurtransferase TusA -like protein; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.
 
  
 0.686
KPY81153.1
SirA-like protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.659
KPY83129.1
Glutathione S-transferase domain-containing protein.
       0.602
KPY83120.1
Citrate-proton symporter.
       0.542
KPY80243.1
Metal-binding protein.
  
     0.529
rdgC
Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family.
  
     0.527
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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