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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY89460.1H-NS histone. (126 aa)    
Predicted Functional Partners:
KPY82164.1
Uncharacterized protein.
  
     0.762
KPY88459.1
Uncharacterized protein.
  
     0.760
KPY82227.1
Putative Outer membrane protein OmpH.
  
     0.722
KPY90315.1
Uncharacterized protein.
  
     0.705
KPY86138.1
Hypothetical protein.
  
     0.679
KPY84294.1
Alginate regulatory protein MucA.
  
     0.669
KPY89930.1
Uncharacterized protein; Belongs to the UPF0149 family.
  
     0.658
KPY87229.1
Putative lipoprotein.
  
     0.634
KPY87915.1
Putative membrane protein.
  
     0.617
ihfA
Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
   
  
 0.612
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.