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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY89467.1RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (386 aa)    
Predicted Functional Partners:
KPY89472.1
Inner membrane efflux transporter of RND family multidrug efflux pump.
 0.997
macB
Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 0.996
KPY89462.1
NodT family outer membrane efflux lipoprotein.
 
 0.996
KPY89226.1
Multidrug efflux transporter.
 0.978
KPY88883.1
RND efflux system, outer membrane lipoprotein, NodT.
 
 0.976
KPY80769.1
Multidrug efflux RND transporter MexF.
 0.972
KPY89248.1
Outer membrane protein.
 
 0.966
KPY83691.1
AcrB/AcrD/AcrF family transporter.
 0.965
KPY86118.1
AcrB/AcrD/AcrF family transporter.
 0.964
KPY88012.1
Type I secretion outer membrane protein, TolC.
  
 0.924
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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