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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY87236.1Uncharacterized protein. (95 aa)    
Predicted Functional Partners:
KPY87553.1
Uncharacterized protein.
  
     0.774
KPY89419.1
Uncharacterized protein.
  
     0.766
KPY87325.1
MFS transporter.
  
     0.766
KPY88093.1
Uncharacterized protein.
  
     0.760
KPY87949.1
Uncharacterized protein.
  
     0.753
KPY88010.1
Chemosensory protein ChpC.
  
     0.752
KPY85940.1
ArsR family transcriptional regulator.
  
     0.748
KPY87603.1
Hypothetical protein.
  
     0.732
KPY87328.1
Inner membrane protein AmpE.
  
     0.726
KPY84325.1
Uncharacterized protein.
  
     0.716
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.