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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY87258.1Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
KPY87261.1
Short-chain dehydrogenase/reductase SDR.
 
  
 0.963
KPY87245.1
Transcriptional regulator, MerR family.
 
   
 0.862
KPY87239.1
Uncharacterized protein.
 
  
 0.848
KPY87249.1
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
       0.808
KPY87720.1
Putative Lipoprotein.
 
     0.797
KPY87217.1
Uncharacterized protein.
 
   
 0.783
KPY87225.1
Uncharacterized protein.
 
     0.752
KPY86774.1
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
    
 0.751
KPY87231.1
Cyclopropane-fatty-acyl-phospholipid synthase, plant type.
 
     0.558
KPY87227.1
Amine oxidase, flavin-containing protein; Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P)+. May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers; Belongs to the bacterial renalase family.
 
     0.548
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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