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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY87261.1Short-chain dehydrogenase/reductase SDR. (262 aa)    
Predicted Functional Partners:
KPY87258.1
Uncharacterized protein.
 
  
 0.963
KPY82901.1
Non-ribosomal peptide synthetase/polyketide synthetase.
   
 0.884
KPY87053.1
Ornithine acetyl transferase inhibitor.
    
 0.861
KPY87720.1
Putative Lipoprotein.
 
    0.854
KPY87245.1
Transcriptional regulator, MerR family.
 
   
 0.851
KPY80113.1
Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.844
KPY82962.1
Non-ribosomal peptide synthetase, initiating component; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.842
KPY87249.1
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
     0.833
KPY80317.1
Pyoverdine sidechain peptide synthetase II, D-Asp-L-Thr component.
  
 
 0.820
KPY82935.1
Non-ribosomal peptide synthetase, initiating component.
    
 0.820
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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