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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY89151.1LysR family transcriptional regulator. (197 aa)    
Predicted Functional Partners:
KPY89260.1
Unknown protein sequence.
       0.572
KPY85517.1
Large exoprotein involved in heme utilization or adhesion.
  
     0.539
KPY80795.1
Regulatory protein, LysR:LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.518
KPY89059.1
Vanillate monooxygenase, oxygenase subunit.
     
 0.489
KPY89104.1
Glutamine amidotransferase.
       0.444
KPY87574.1
Uncharacterized protein.
  
     0.432
KPY89136.1
DNA-binding protein.
 
  
 0.426
KPY89109.1
Ferredoxin:oxidoreductase FAD/NAD-binding:oxidoreductase FAD-binding region.
     
 0.423
KPY87527.1
GAD-like domain protein.
  
     0.421
KPY86489.1
LysR family transcriptional regulator.
  
     0.420
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.