STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPY86138.1Hypothetical protein. (79 aa)    
Predicted Functional Partners:
KPY81600.1
LrgA-associated membrane protein LrgB.
  
  
 0.875
KPY80840.1
Uncharacterized protein.
  
     0.710
KPY88009.1
Lipopolysaccharide kinase.
  
     0.702
KPY89460.1
H-NS histone.
  
     0.679
KPY80833.1
Transcriptional regulator.
  
     0.667
KPY89278.1
H-NS-like protein.
  
     0.637
KPY87956.1
Uncharacterized protein.
  
     0.630
KPY84610.1
Uncharacterized protein.
  
     0.624
KPY87908.1
Potassium efflux protein KefA.
  
     0.592
KPY90347.1
Uncharacterized protein.
  
     0.590
Your Current Organism:
Pseudomonas syringae tagetis
NCBI taxonomy Id: 129140
Other names: ICMP 4091, LMG 5090, LMG:5090, NCPPB 2488, P. syringae pv. tagetis, Pseudomonas syringae pv. tagetis, Pseudomonas tagetis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.