STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK70858.1Amino acid ABC transporter permease. (214 aa)    
Predicted Functional Partners:
KRK70859.1
Amino acid ABC transporter substrate-binding protein.
 0.998
KRK70857.1
ABC-type amino acid transport system protein.
 
 
 
0.995
KRK70860.1
ABC-type polar amino acid transport system, ATPase component.
 0.994
KRK73256.1
Phosphate ABC transporter ATP-binding protein.
 0.979
KRK73862.1
ABC-type polar amino acid transport system, ATPase component.
 0.978
KRK72919.1
ABC-type polar amino acid transport system, ATPase component.
 0.974
KRK70956.1
Amino acid ABC transporter, ATP-binding protein.
 0.973
KRK73230.1
ABC-type polar amino acid transport system, ATPase component.
 0.908
KRK70954.1
Amino acid ABC transporter, substrate binding protein; Belongs to the bacterial solute-binding protein 3 family.
  0.843
KRK73231.1
Amino acid ABC transporter periplasmic protein.
 0.833
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.