STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK70920.11,4-dihydroxy-2-naphthoate polyprenyltransferase. (300 aa)    
Predicted Functional Partners:
KRK70921.1
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
  
 0.926
KRK70412.1
NADH dehydrogenase, FAD-containing subunit.
 
  
  0.847
KRK70415.1
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
 
  
 0.838
KRK71826.1
hydroxymethylglutaryl-CoA reductase.
    
 
 0.799
KRK70922.1
Cytochrome D ABC transporter ATP-binding and permease.
 
   
 0.781
KRK70923.1
ABC superfamily ATP binding cassette transporter, ABC membrane protein.
 
     0.764
KRK70919.1
Metallophosphoesterase.
       0.693
KRK71737.1
Flavoprotein.
  
     0.574
KRK70409.1
Prenyltransferase, UbiA family.
  
  
 
0.568
KRK70414.1
Hypothetical protein.
 
   
 0.539
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.