STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK71034.1Glycine betaine ABC transporter periplasmic protein. (296 aa)    
Predicted Functional Partners:
KRK71035.1
Glycine betaine carnitine ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.999
KRK71036.1
Quaternary-amine-transporting ATPase.
 
 0.999
KRK70471.1
Glycine betaine carnitine choline ABC transporter substrate-binding and permease.
 
 
 0.823
KRK70343.1
Acetaldehyde dehydrogenase (acetylating); In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.506
KRK71033.1
Hypothetical protein.
       0.463
KRK73255.1
Amino acid ABC transporter permease.
     
 0.454
KRK72918.1
ABC-type amino acid transport signal transduction system, periplasmic component domain.
     
 0.454
KRK72920.1
ABC-type amino acid transport signal transduction system.
     
 0.454
KRK73863.1
ABC transporter glutamine-binding periplasmic protein.
     
 0.454
KRK73968.1
Amino acid ABC transporter permease.
     
 0.454
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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