STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK70397.1Hypothetical protein. (415 aa)    
Predicted Functional Partners:
KRK70396.1
ABC-type sugar transport system, permease component.
 
  0.932
KRK70395.1
L-arabinose transport system permease AraQ.
 
  0.920
KRK72540.1
Sugar ABC transporter ATPase.
  
 0.861
KRK70398.1
Hypothetical protein.
 
    0.823
KRK70399.1
Hypothetical protein.
  
    0.758
KRK70495.1
Sugar ABC transporter permease.
 
  0.748
KRK73990.1
Sugar abc transporter, permease protein.
 
  0.742
KRK70494.1
L-arabinose transport system permease AraQ.
  
  0.715
KRK72942.1
Hypothetical protein.
  
  0.715
KRK74086.1
ABC-type maltose transport system, permease component.
  
  0.715
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.