STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK70401.1Hypothetical protein. (509 aa)    
Predicted Functional Partners:
KRK71062.1
Sucrose-specific PTS system IIBC component.
  
  
 0.999
KRK73997.1
PTS system beta-glucoside-specific EIIBCA component.
  
  
 0.999
KRK70400.1
Phosphohydrolase, Icc family protein.
 
    0.759
KRK70397.1
Hypothetical protein.
 
     0.673
KRK70398.1
Hypothetical protein.
 
     0.612
KRK72469.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.574
KRK73984.1
Alpha-1,2-mannosidase.
 
   
 0.550
KRK72938.1
Family 2 glycoside hydrolase; Belongs to the glycosyl hydrolase 2 family.
 
 0.543
KRK70399.1
Hypothetical protein.
       0.508
KRK71740.1
Beta-lactamase.
 
  
  0.497
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.