STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK70471.1Glycine betaine carnitine choline ABC transporter substrate-binding and permease. (510 aa)    
Predicted Functional Partners:
KRK70470.1
Abc transporter atpase.
 0.999
potA
ABC-type spermidine putrescine transport system, ATPase component; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.964
guaB
IMP dehydrogenase GMP reductase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
  0.954
KRK71036.1
Quaternary-amine-transporting ATPase.
 
 0.938
KRK70324.1
CBS domain-containing protein.
    
  0.918
KRK70003.1
CBS domain-containing protein.
    
  0.846
KRK70469.1
Glutathione reductase.
 
   
 0.827
KRK71034.1
Glycine betaine ABC transporter periplasmic protein.
 
 
 0.823
KRK70822.1
Hypothetical protein.
      0.771
KRK71035.1
Glycine betaine carnitine ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
0.752
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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