STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK70488.1Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family. (470 aa)    
Predicted Functional Partners:
KRK70489.1
Hypothetical protein.
 
   
 0.904
KRK70498.1
alpha-N-arabinofuranosidase.
 
 
 0.876
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.812
KRK70499.1
alpha-N-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.812
KRK70497.1
alpha-N-arabinofuranosidase.
 
 
 0.786
KRK70490.1
araB protein.
  
  
 0.753
KRK73905.1
Polysaccharide deacetylase.
     
 0.539
KRK70485.1
Hypothetical protein.
 
   
 0.519
KRK70484.1
Transcriptional regulator, AraC family.
  
  
  0.468
KRK73983.1
Transcription regulator.
  
  
  0.456
Your Current Organism:
Lactobacillus nasuensis
NCBI taxonomy Id: 1291734
Other names: L. nasuensis JCM 17158, Lactobacillus nasuensis JCM 17158, Lactobacillus nasuensis SU 18, Lactobacillus sp. SU 18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.